SRI International
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Pathway collages: personalized multi-pathway diagrams
We define software for constructing personalized multi-pathway diagrams called pathway-collages using a combination of manual and automatic layouts.
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An Annotated Corpus and Method for Analysis of Ad-Hoc Structures Embedded in Text
We describe a method for identifying and performing functional analysis of structured regions that are embedded in natural language documents, such as tables or key-value lists.
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Pathway Schools Initiative Developmental Evaluation-Learning Brief 1 (January 2016)
To support its Pathway Schools Initiative, The McKnight Foundation has engaged initiative leaders in a developmental evaluation (DE) led by SRI International and Child Trends.
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Solution Authoring via Demonstration and Annotation: An Empirical Study
This paper reports on a concept validation study that provides an empirical basis for the design of solution authoring frameworks based on end-user programming techniques.
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Effect of Transition Planning on Postsecondary Support Receipt by Students with Disabilities
The authors of this article analyzed data from the National Longitudinal Transition Study-2 to determine the effect of receiving transition planning education and having a transition plan that specified needed postsecondary accommodations on the receipt of disability-specific services and generally available supports at the postsecondary level by students with disabilities.
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How Much Does Curation Cost?
Here we calculate the cost of biocuration of articles for the EcoCyc database as $219 per article over a 5-year period.
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The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
The MetaCyc database (MetaCyc.org) is a freely accessible comprehensive database describing metabolic pathways and enzymes from all domains of life.
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Diagnosis cloud: Sharing knowledge across cellular networks
This paper presents a novel diagnosis cloud framework that enables the extraction and transfer of knowledge from one network to another. It also presents use cases and requirements. We present the implementation details of the diagnosis cloud framework for two specific types of models: topic models and Markov Logic Networks (MLNs).
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The Time Is Right to Focus on Model Organism Metabolomes
We propose a grand challenge for metabolomics studies of model organisms: to identify and map all metabolites onto metabolic pathways, to develop quantitative metabolic models for model organisms, and to relate organism metabolic pathways within the context of evolutionary metabolomics, i.e., phylometabolomics.
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Mobility enhancement in polymer organic semiconductors arising from increased interconnectivity at the level of polymer segments
We present a model to estimate the mobility in polymers and to gauge the effect of increased interconnectivity at the level of polymer segments.
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A Content-Centric Networking Forwarding Design for a Network Processor
We describe a method to use hardware-assisted hash tables for CCNx routing on variable length names.
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System optimization of a heat-switch-based electrocaloric heat pump
We present detailed models and analysis that elucidate the key parameters for performance optimization.