This article highlights recent improvements to the curated data in the areas of metabolism, transport, DNA repair, and regulation of gene expression.
Information & computer science publications
The BioCyc Metabolic Network Explorer
The Metabolic Network Explorer is a new addition to the BioCyc.org website and the Pathway Tools software suite that supports the interactive exploration of metabolic networks.
Speech‐based markers for post traumatic stress disorder in US veterans
This study demonstrates that a speech-based algorithm can objectively differentiate PTSD cases from controls.
Resources to discover and use short linear motifs in viral proteins
We survey viral uses of SLiMs to mimic host proteins, and information resources available for motif discovery.
Using pathway covering to explore connections among metabolites
Pathway Covering is a new algorithm that takes a list of metabolites (compounds) and determines a minimum-cost set of metabolic pathways in an organism that includes (covers) all the metabolites in the list.
The Omics Dashboard for interactive exploration of gene-expression data
The Omics Dashboard is a software tool for interactive exploration and analysis of gene-expression datasets.
The Future of the Internet of Things
The IoT can become ubiquitous worldwide—if the pursuit of systemic trustworthiness can overcome the potential risks.
Building Code for the Internet of Things
In this document, we focus on the challenges associated with composing systems, rather than building individual programs or devices.
FHE over the Integers: Decomposed and Batched in the Post-Quantum Regime
We propose a comprehensive study of applying third generation FHE techniques to the regime of FHE-OI. We present and analyze a third generation FHE-OI based on decisional AGCD without the noise-free assumption.