Publications
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Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology
Pathway Tools is a production-quality software environment for creating a type of model-organism database called a Pathway/Genome Database (PGDB).
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Sunbay Digital Mathematics. Pilot Year 1 Final Report Brief: Learning Gains In Pinellas County, Florida
In June 2009 the Helios Education Foundation and the Pinellas Education Foundation provided funding for the pilot year of the SunBay Digital Mathematics program.
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Switching Logic Synthesis for Reachability
We consider the problem of driving a system from some initial configuration to a desired configuration while avoiding some unsafe configurations.
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Tomographic Molecular Imaging of X-Ray-Excitable Nanoparticles
X-ray luminescence computed tomography (XLCT) is proposed as a new dual molecular/anatomical imaging modality.
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Automatic Speech Recognition of Multiple Accented English Data
We investigate the effect of multiple accents on an English broadcast news recognition system.
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An Advanced Web Query Interface for Biological Databases
We present a web interface for building precise queries for biological DBs that can construct much more precise queries than most web-based query forms, yet that is user friendly enough…
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Can We Get Better Assessment from a Tutoring System Compared to Traditional Paper Testing? Can We Have Our Cake (Better Assessment) and Eat It Too (Student Learning During the Test)?
We report a study analyzing 40-minutes data of totally students from two school years. The result suggests that for the purpose of assessing student performance, it is more efficient for…
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Discovery of Numerous Specific Topics Via Term Co-Occurrence Analysis
We describe efficient techniques for construction of large term co-occurrence graphs, and investigate an application to the discovery of numerous fine-grained (specific) topics.
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Folate Receptor Targeted Nanophosphors for Enhanced Tumor Radiotherapy
Here we present a folic acid (FA) conjugated nanophosphor (NP) intended to enhance the therapeutic effect of radiotherapy by augmenting the production of reactive oxygen species with simultaneous photodynamic therapy…
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Assessing 21st Century Skills: Summary Of A Workshop
Pellegrino reflects on the need for substantial change in what we expect students to know and be able to do in science, how science should be taught, and how science…
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Unraveling a Card Trick
The principle underlying the card trick can be proved in a number of ways. We present the argument as a series of transformations that demystify the trick and describe its…
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Development of an Autonomous Sea Ice Tethered Buoy for the Study of Ocean-Atmosphere-Sea Ice-Snow Pack Interactions: the O-Buoy
A buoy based instrument platform (the "O-buoy") was designed, constructed, and field tested for year-round measurement of ozone, bromine monoxide, carbon dioxide, and meteorological variables over Arctic sea ice.