Artificial intelligence publications
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Online Query Relaxation via Bayesian Causal Structures Discovery
We introduce a novel algorithm, TOQR, for relaxing failed queries over databases, that is, over-constrained DNF queries that return an empty result.
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The complete genome sequence of Francisella tularensis, the causative agent of tularemia
We report the complete genome sequence of a highly virulent isolate of F. tularensis. The sequence uncovers previously uncharacterized genes encoding type IV pili, a surface polysaccharide and iron-acquisition systems.
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Morphology induction from term clusters
We address the problem of learning a morphological automaton directly from a monolingual text corpus without recourse to additional resources.
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Identifying Candidate Genes Using The BioWarehouse: A Case Study
The BioWarehouse is an open source data warehousing environment focused on supporting bioinformatics databases (DBs). BioWarehouse integrates public source DBs such as Swiss-Prot and GenBank into a unified normalized schema…
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EcoCyc: a comprehensive database resource for Escherichia coli
The mission for EcoCyc is to contain both computable descriptions of, and detailed comments describing, all genes, proteins, pathways and molecular interactions in E.coli.
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Supporting the Pattern Development Cycle in Intelligence Gathering
This paper discusses the cycle through a use case of the Link Analysis Workbench (LAW), a tool for discovering and analyzing situations of interest in large relational data sets.
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A Collaborative Framework for Managing Uncertainty and Cognitive Bias
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Execution Monitoring and Replanning with Incremental and Collaborative Scheduling
We describe the Flight Manager Assistant (FMA), a prototype system, designed to support real-time management of airlift operations at the USAF Air Mobility Command (AMC).
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Querying and Computing with BioCyc Databases
We describe multiple methods for accessing and querying the complex and integrated cellular data in the BioCyc family of databases.
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The Role of Higher-Order Constructs in the Inexact Matching of Semantic Graphs
This paper reports the results of an experimental analysis of higher-order constructs in graphical patterns and their effect on pattern matching efficiency.
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Database Editing Metrics for Pattern Matching
This paper introduces a family of metrics to measure the degree of qualitative match between a database and a pattern, that is, an elastic constraint on database objects and their…
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The SPARK Agent Framework
We describe the SRI Procedural Agent Realization Kit (SPARK), a new BDI agent framework that combines scaleability and the clean semantic underpinning of more formal agent frameworks.